U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRT-CGT5-1 tRNA-Thr (anticodon CGT) 5-1 [ Homo sapiens (human) ]

Gene ID: 100189300, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
TRT-CGT5-1provided by HGNC
Official Full Name
tRNA-Thr (anticodon CGT) 5-1provided by HGNC
Primary source
HGNC:HGNC:34866
See related
AllianceGenome:HGNC:34866
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAT13
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
6p22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (27618356..27618429)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (27488004..27488077)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (27586135..27586208)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Leu (anticodon CAA) 3-1 Neighboring gene tRNA-Leu (anticodon CAA) 2-1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24296 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24297 Neighboring gene tRNA-Ile (anticodon TAT) 2-3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:27610387-27611160 Neighboring gene Sharpr-MPRA regulatory region 3569 Neighboring gene tRNA-Val (anticodon AAC) 3-1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • tRNA-Thr-CGT-5-1
  • transfer RNA threonine 13 (anticodon CGU)
  • transfer RNA-Thr (CGT) 5-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    27618356..27618429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    27488004..27488077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases