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MIR1244-1 microRNA 1244-1 [ Homo sapiens (human) ]

Gene ID: 100302285, updated on 10-Oct-2023

Summary

Official Symbol
MIR1244-1provided by HGNC
Official Full Name
microRNA 1244-1provided by HGNC
Primary source
HGNC:HGNC:35310
See related
Ensembl:ENSG00000284378 miRBase:MI0006379; AllianceGenome:HGNC:35310
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIR1244; MIRN1244; hsa-mir-1244; hsa-mir-1244-1
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Annotation information
Note: MIR1244-1 (GeneID 100302285) was annotated incorrectly on NCBI's Annotation Release 105. Its correct location is chr12: 9392063-9392147 (-). [17 Jun 2014]
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Genomic context

Location:
2q37.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (231713314..231713398)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (232197884..232197968)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (232578024..232578108)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:232510968-232511721 Neighboring gene RNA, 7SL, cytoplasmic 499, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12435 Neighboring gene RN7SL499P-PTMA intergenic region enhancers Neighboring gene Sharpr-MPRA regulatory region 275 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232544680-232545472 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12439 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232546266-232547057 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17310 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232550745-232551470 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232552197-232552921 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232561163-232561664 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232561665-232562164 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232571367-232572005 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232572645-232573282 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232573283-232573921 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232573922-232574559 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:232575199-232575835 Neighboring gene uncharacterized LOC124906134 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232576909-232577409 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17313 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232579381-232579910 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:232579911-232580440 Neighboring gene Sharpr-MPRA regulatory region 12341 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17315 Neighboring gene prothymosin alpha Neighboring gene phosphodiesterase 6D Neighboring gene Sharpr-MPRA regulatory region 13150 Neighboring gene RNA, U6 small nuclear 1342, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr2:232645182-232645405 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12446 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17317 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12447 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12448 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12449 Neighboring gene COP9 signalosome subunit 7B Neighboring gene ribosomal protein L28 pseudogene 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036052.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC073476
    Related
    ENST00000612829.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    231713314..231713398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    232197884..232197968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)