U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mif macrophage migration inhibitory factor [ Ictalurus punctatus (channel catfish) ]

Gene ID: 100305114, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
mif
Gene description
macrophage migration inhibitory factor
See related
Ensembl:ENSIPUG00000016276
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 8 NC_030423.2 (25326316..25328850, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 8 NC_030423.1 (24753911..24756387, complement)

Chromosome 8 - NC_030423.2Genomic Context describing neighboring genes Neighboring gene cleavage factor polyribonucleotide kinase subunit 1 Neighboring gene selenoprotein H Neighboring gene zinc finger protein 623 Neighboring gene calcium binding protein 2b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular cloning and identification of macrophage migration inhibitory factor (MIF) in teleost fish. Jin HJ, et al. Dev Comp Immunol, 2007. PMID 17442392
  2. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phenylpyruvate tautomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
macrophage migration inhibitory factor
Names
macrophage migration inhibitory factor (glycosylation-inhibiting factor)
NP_001187233.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001200304.1 → NP_001187233.1  macrophage migration inhibitory factor

    See identical proteins and their annotated locations for NP_001187233.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ639947
    UniProtKB/TrEMBL
    Q0ZBS3
    Related
    ENSIPUP00000024105.1, ENSIPUT00000025122.1
    Conserved Domains (1) summary
    cl00235
    Location:2 → 115
    4Oxalocrotonate_Tautomerase; 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one ...

RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030423.2 Reference Coco_2.0 Primary Assembly

    Range
    25326316..25328850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.