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Dynlt1a dynein light chain Tctex-type 1A [ Mus musculus (house mouse) ]

Gene ID: 100310872, updated on 8-Feb-2024

Summary

Official Symbol
Dynlt1aprovided by MGI
Official Full Name
dynein light chain Tctex-type 1Aprovided by MGI
Primary source
MGI:MGI:3807506
See related
Ensembl:ENSMUSG00000092074 AllianceGenome:MGI:3807506
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AGS2; Dynlt1; Tctel1; Tctex1; Tctex-1
Expression
Ubiquitous expression in testis adult (RPKM 116.9), CNS E18 (RPKM 51.4) and 27 other tissues See more
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Genomic context

See Dynlt1a in Genome Data Viewer
Location:
17 A1; 17 3.88 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (6356619..6367749, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (6306344..6317520, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene TUB like protein 4 Neighboring gene fibrillarin pseudogene Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 6 Neighboring gene STARR-seq mESC enhancer starr_41716 Neighboring gene transmembrane protein 181A Neighboring gene STARR-seq mESC enhancer starr_41717 Neighboring gene STARR-positive B cell enhancer mm9_chr17:6314045-6314346 Neighboring gene STARR-seq mESC enhancer starr_41718 Neighboring gene STARR-seq mESC enhancer starr_41719 Neighboring gene protein phosphatase 1, regulatory inhibitor subunit 2, pseudogene 1 Neighboring gene tubby like protein 4 pseudogene Neighboring gene fibrillarin pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Clone Names

  • MGC107111

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular_function ND
No biological Data available
more info
 
enables transmembrane transporter binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in axonal growth cone ISO
Inferred from Sequence Orthology
more info
 
part_of cytoplasmic dynein complex ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
part_of dynein complex ISO
Inferred from Sequence Orthology
more info
 
located_in lamellipodium ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in secretory vesicle ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
dynein light chain Tctex-type 1A
Names
Activator of G-protein signaling 2
Dynein light chain Tctex-type 1
T-complex testis-specific protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166629.2NP_001160101.1  dynein light chain Tctex-type 1A

    See identical proteins and their annotated locations for NP_001160101.1

    Status: VALIDATED

    Source sequence(s)
    AC183097, AK030569, BC055792, BC087868
    Consensus CDS
    CCDS49935.1
    UniProtKB/Swiss-Prot
    P51807, Q5M8S6
    UniProtKB/TrEMBL
    A1E5T5
    Related
    ENSMUSP00000127990.2, ENSMUST00000169415.3
    Conserved Domains (1) summary
    pfam03645
    Location:16111
    Tctex-1; Tctex-1 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    6356619..6367749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)