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LOC100362109 hypothetical protein LOC100362109 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362109, updated on 13-Apr-2024

Summary

Symbol
LOC100362109provided by RGD
Full Name
hypothetical protein LOC100362109provided by RGD
Primary source
RGD:2318773
See related
Ensembl:ENSRNOG00000030150 AllianceGenome:RGD:2318773
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human C22orf46 (chromosome 22 putative open reading frame 46). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward (RPKM 107.3) See more
Orthologs
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Genomic context

Location:
7q34
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (115458986..115466378)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (113578871..113586264)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (123295519..123304163)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit a-like Neighboring gene small nuclear ribonucleoprotein 13 Neighboring gene meiotic double-stranded break formation protein 1 Neighboring gene uncharacterized LOC134479947 Neighboring gene coiled-coil domain containing 134

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein LOC100362109
Names
uncharacterized protein C22orf46 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001409219.1NP_001396148.1  uncharacterized protein LOC100362109

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000007
    UniProtKB/TrEMBL
    F1LZD2
    Related
    ENSRNOP00000046655.2, ENSRNOT00000048614.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    115458986..115466378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)