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Fam90a1 family with sequence similarity 90, member A1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362477, updated on 30-Sep-2021

Summary

Symbol
Fam90a1provided by RGD
Full Name
family with sequence similarity 90, member A1provided by RGD
Primary source
RGD:2318111
See related
EnsemblRapid:ENSRNOG00000067448
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Fam90a13p; Fam90a1-ps2
Expression
Biased expression in Testes (RPKM 2.3), Liver (RPKM 0.7) and 4 other tissues See more
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Genomic context

See Fam90a1 in Genome Data Viewer
Location:
16q12.5
Exon count:
4
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (70098439..70106147, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (75001033..75016173, complement)

Chromosome 16 - NC_051351.1Genomic Context describing neighboring genes Neighboring gene putative protein FAM90A8P Neighboring gene putative protein FAM90A8P Neighboring gene putative protein FAM90A8P Neighboring gene defensin beta 13

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
putative protein FAM90A8P; uncharacterized protein LOC100362477
Names
family with sequence similarity 90, member A1-pseudogene 2
family with sequence similarity 90, member A13, pseudogene
putative protein FAM90A7P
rCG43168-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051351.1 Reference mRatBN7.2 Primary Assembly

    Range
    70098439..70106147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002728417.5XP_002728463.3  putative protein FAM90A8P

    Related
    ENSRNOP00000096401.1, ENSRNOT00000098123.1
    Conserved Domains (1) summary
    pfam15288
    Location:3974
    zf-CCHC_6; Zinc knuckle
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