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Klhl33 kelch-like family member 33 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362676, updated on 8-Mar-2024

Summary

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Official Symbol
Klhl33provided by RGD
Official Full Name
kelch-like family member 33provided by RGD
Primary source
RGD:2324282
See related
Ensembl:ENSRNOG00000025868 AllianceGenome:RGD:2324282
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human KLHL33 (kelch like family member 33). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Muscle (RPKM 418.9) and Heart (RPKM 111.5) See more
Orthologs
human mouse all
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Genomic context

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See Klhl33 in Genome Data Viewer
Location:
15p14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (26579473..26589766, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (24105923..24114445, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (27811226..27819808, complement)

Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene poly (ADP-ribose) polymerase 2 Neighboring gene ribonuclease P RNA component H1 Neighboring gene telomerase associated protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene O-sialoglycoprotein endopeptidase Neighboring gene apurinic/apyrimidinic endodeoxyribonuclease 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
kelch-like protein 33
Names
kelch-like 33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086033.1 Reference GRCr8

    Range
    26579473..26589766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002728195.7 → XP_002728241.3  kelch-like protein 33

    See identical proteins and their annotated locations for XP_002728241.3

    UniProtKB/TrEMBL
    F1M601
    Related
    ENSRNOP00000035056.6
    Conserved Domains (8) summary
    smart00612
    Location:583 → 629
    Kelch; Kelch domain
    smart00225
    Location:234 → 330
    BTB; Broad-Complex, Tramtrack and Bric a brac
    smart00875
    Location:335 → 435
    BACK; BTB And C-terminal Kelch
    TIGR03547
    Location:513 → 765
    muta_rot_YjhT; mutatrotase, YjhT family
    sd00038
    Location:572 → 615
    Kelch; KELCH repeat [structural motif]
    pfam00651
    Location:224 → 326
    BTB; BTB/POZ domain
    pfam01344
    Location:667 → 712
    Kelch_1; Kelch motif
    cl02518
    Location:100 → 190
    BTB; BTB/POZ domain
Nucleotide Protein Strain
Heading Accession and Version

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