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Auts2 activator of transcription and developmental regulator AUTS2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362819, discontinued on 10-May-2023

Summary

Symbol
Auts2provided by RGD
Full Name
activator of transcription and developmental regulator AUTS2provided by RGD
Primary source
RGD:2323959
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Auts2l1
Expression
Biased expression in Heart (RPKM 17.3), Brain (RPKM 12.9) and 8 other tissues See more
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Genomic context

See Auts2 in Genome Data Viewer
Location:
12q12
Exon count:
19
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (27155362..28252752)
106 latest, but not current Rn_Celera (GCF_000002265.2) 12 AC_000080.1 (25842313..26925231)

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

General protein information

Names
activator of transcription and developmental regulator AUTS2
AUTS2, activator of transcription and developmental regulator
autism susceptibility candidate 2
autism susceptibility candidate 2-like
autism susceptibility candidate 2-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005111.4 Reference Rnor_6.0 Primary Assembly

    Range
    27155362..28252752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008769171.2XP_008767393.2  

  2. XM_008769174.2XP_008767396.2  

  3. XM_008769173.2XP_008767395.2  

  4. XM_008769175.2XP_008767397.2  

  5. XM_008769172.2XP_008767394.2  

  6. XM_017598627.1XP_017454116.1  

Alternate Rn_Celera

Genomic

  1. AC_000080.1 Alternate Rn_Celera

    Range
    25842313..26925231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017604555.1XP_017460044.1  

  2. XM_017604557.1XP_017460046.1  

  3. XM_017604559.1XP_017460048.1  

  4. XM_017604556.1XP_017460045.1  

  5. XM_017604558.1XP_017460047.1