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SV2B synaptic vesicle glycoprotein 2B [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100391227, updated on 8-Mar-2024

Summary

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Gene symbol
SV2B
Gene description
synaptic vesicle glycoprotein 2B
See related
Ensembl:ENSCJAG00000019298
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (18431628..18623928)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (18468916..18661367)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene golgin subfamily A member 6-like protein 6 Neighboring gene WAS/WASL-interacting protein family member 3-like Neighboring gene uncharacterized LOC128932498 Neighboring gene solute carrier organic anion transporter family member 3A1 Neighboring gene unconventional prefoldin RPB5 interactor 1-like Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptic vesicle glycoprotein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    18431628..18623928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035303876.2 → XP_035159767.1  synaptic vesicle glycoprotein 2B

    UniProtKB/TrEMBL
    F7H7H5, U3DKS5
    Conserved Domains (1) summary
    TIGR01299
    Location:8 → 683
    synapt_SV2; synaptic vesicle protein SV2

  2. XM_035303880.2 → XP_035159771.1  synaptic vesicle glycoprotein 2B

    UniProtKB/TrEMBL
    F7H7H5, U3DKS5
    Conserved Domains (1) summary
    TIGR01299
    Location:8 → 683
    synapt_SV2; synaptic vesicle protein SV2

  3. XM_017973290.3 → XP_017828779.2  synaptic vesicle glycoprotein 2B

    UniProtKB/TrEMBL
    F7H7H5, U3DKS5
    Conserved Domains (1) summary
    TIGR01299
    Location:8 → 683
    synapt_SV2; synaptic vesicle protein SV2

  4. XM_035303878.2 → XP_035159769.1  synaptic vesicle glycoprotein 2B

    UniProtKB/TrEMBL
    F7H7H5, U3DKS5
    Conserved Domains (1) summary
    TIGR01299
    Location:8 → 683
    synapt_SV2; synaptic vesicle protein SV2

  5. XM_035303877.2 → XP_035159768.1  synaptic vesicle glycoprotein 2B

    UniProtKB/TrEMBL
    F7H7H5, U3DKS5
    Conserved Domains (1) summary
    TIGR01299
    Location:8 → 683
    synapt_SV2; synaptic vesicle protein SV2

  6. XM_035303879.2 → XP_035159770.1  synaptic vesicle glycoprotein 2B

    UniProtKB/TrEMBL
    F7H7H5, U3DKS5
    Conserved Domains (1) summary
    TIGR01299
    Location:8 → 683
    synapt_SV2; synaptic vesicle protein SV2
Nucleotide Protein
Heading Accession and Version

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