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FGF1 fibroblast growth factor 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100392014, updated on 8-Mar-2024

Summary

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Gene symbol
FGF1
Gene description
fibroblast growth factor 1
See related
Ensembl:ENSCJAG00000018301
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (39076607..39184283, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (39356517..39464211, complement)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118150311 Neighboring gene sprouty RTK signaling antagonist 4 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene small nucleolar RNA SNORA36 family Neighboring gene Rho GTPase activating protein 26 Neighboring gene 40S ribosomal protein S3a-like Neighboring gene nuclear receptor subfamily 3 group C member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibroblast growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibroblast growth factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    39076607..39184283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008986770.3 → XP_008985018.1  fibroblast growth factor 1 isoform X1

    See identical proteins and their annotated locations for XP_008985018.1

    UniProtKB/TrEMBL
    B0KW92, F7IJV2
    Related
    ENSCJAP00000042176.1
    Conserved Domains (1) summary
    pfam00167
    Location:25 → 148
    FGF; Fibroblast growth factor

  2. XM_017968523.3 → XP_017824012.1  fibroblast growth factor 1 isoform X3

    UniProtKB/TrEMBL
    F7IJV2
    Related
    ENSCJAP00000043176.1
    Conserved Domains (1) summary
    cl00060
    Location:25 → 57
    FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...

  3. XM_008986790.3 → XP_008985038.1  fibroblast growth factor 1 isoform X2

    See identical proteins and their annotated locations for XP_008985038.1

    Conserved Domains (1) summary
    pfam00167
    Location:25 → 147
    FGF; Fibroblast growth factor

  4. XM_002744295.5 → XP_002744341.1  fibroblast growth factor 1 isoform X1

    See identical proteins and their annotated locations for XP_002744341.1

    UniProtKB/TrEMBL
    B0KW92, F7IJV2
    Related
    ENSCJAP00000033894.2
    Conserved Domains (1) summary
    pfam00167
    Location:25 → 148
    FGF; Fibroblast growth factor

  5. XM_035292202.2 → XP_035148093.1  fibroblast growth factor 1 isoform X3

    Conserved Domains (1) summary
    cl00060
    Location:25 → 57
    FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...

  6. XM_035292201.2 → XP_035148092.1  fibroblast growth factor 1 isoform X2

    Conserved Domains (1) summary
    pfam00167
    Location:25 → 147
    FGF; Fibroblast growth factor

  7. XM_008986777.4 → XP_008985025.1  fibroblast growth factor 1 isoform X1

    See identical proteins and their annotated locations for XP_008985025.1

    UniProtKB/TrEMBL
    B0KW92, F7IJV2
    Conserved Domains (1) summary
    pfam00167
    Location:25 → 148
    FGF; Fibroblast growth factor
Nucleotide Protein
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