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gsdf gonadal somatic cell derived factor [ Oryzias latipes (Japanese medaka) ]

Gene ID: 100415911, updated on 7-Jun-2022

Summary

Gene symbol
gsdf
Gene description
gonadal somatic cell derived factor
See related
EnsemblRapid:ENSORLG00000022492
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
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Genomic context

See gsdf in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 12 NC_019870.2 (10455047..10458695, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 12 NC_019870.1 (9735198..9738846, complement)

Chromosome 12 - NC_019870.2Genomic Context describing neighboring genes Neighboring gene AF4/FMR2 family member 1 Neighboring gene uncharacterized LOC105355224 Neighboring gene serine/threonine-protein phosphatase with EF-hands 2 Neighboring gene nucleoporin 54

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
gonadal somatic cell derived factor
Names
gonadal soma derived factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177742.1NP_001171213.1  gonadal somatic cell derived factor precursor

    See identical proteins and their annotated locations for NP_001171213.1

    Status: PROVISIONAL

    Source sequence(s)
    AB525390
    UniProtKB/TrEMBL
    D4QE41
    Related
    ENSORLP00000042059.1, ENSORLT00000030736.2
    Conserved Domains (1) summary
    pfam00019
    Location:112205
    TGF_beta; Transforming growth factor beta like domain

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019870.2 Reference ASM223467v1 Primary Assembly

    Range
    10455047..10458695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)