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FAM107B family with sequence similarity 107 member B [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100464372, updated on 8-Mar-2024

Summary

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Gene symbol
FAM107B
Gene description
family with sequence similarity 107 member B
Locus tag
PANDA_020060
See related
Ensembl:ENSAMEG00000001488
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 15 NC_048232.1 (13149830..13386387, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219260.1 (108120..138128, complement)

Chromosome 15 - NC_048232.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117796420 Neighboring gene uncharacterized LOC117796451 Neighboring gene uncharacterized LOC117796264 Neighboring gene 40S ribosomal protein S20-like Neighboring gene cerebral dopamine neurotrophic factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein FAM107B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048232.1 Reference ASM200744v2 Primary Assembly

    Range
    13149830..13386387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034643412.1 → XP_034499303.1  protein FAM107B isoform X1

    UniProtKB/TrEMBL
    A0A7N5JX33
    Related
    ENSAMEP00000031758.1, ENSAMET00000038362.1

  2. XM_002929735.4 → XP_002929781.1  protein FAM107B isoform X2

    See identical proteins and their annotated locations for XP_002929781.1

    UniProtKB/TrEMBL
    D2I3H1
    Related
    ENSAMEP00000024150.1, ENSAMET00000037773.1
    Conserved Domains (1) summary
    pfam06625
    Location:9 → 120
    DUF1151; Protein of unknown function (DUF1151)
Nucleotide Protein
Heading Accession and Version

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