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pvalb parvalbumin [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100486372, updated on 8-Mar-2024

Summary

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Official Symbol
pvalbprovided by Xenbase
Official Full Name
parvalbuminprovided by Xenbase
Primary source
Xenbase:XB-GENE-942844
See related
Ensembl:ENSXETG00000009373
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See pvalb in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (123375026..123393536)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (112942725..112961239)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene colony stimulating factor 2 receptor beta common subunit Neighboring gene neutrophil cytosolic factor 4 Neighboring gene intraflagellar transport 27 Neighboring gene calcium channel, voltage-dependent, gamma subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
parvalbumin alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    123375026..123393536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002934220.5 → XP_002934266.1  parvalbumin alpha

    UniProtKB/TrEMBL
    A0A803KBU0, F7ECE5
    Related
    ENSXETP00000020659.5, ENSXETT00000020659.5
    Conserved Domains (1) summary
    cd16254
    Location:9 → 109
    EFh_parvalbumin_alpha; EF-hand, calcium binding motif, found in alpha-parvalbumin
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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