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myh11 myosin heavy chain 11 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100490639, updated on 8-Mar-2024

Summary

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Official Symbol
myh11provided by Xenbase
Official Full Name
myosin heavy chain 11provided by Xenbase
Primary source
Xenbase:XB-GENE-6459772
See related
Ensembl:ENSXETG00000019650
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
aat4; faa4; smhc; smmhc; sm-mhc
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
43
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (33952969..34004861)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (28101509..28151910)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 1 Neighboring gene centrosomal protein 20 Neighboring gene nudE neurodevelopment protein 1 Neighboring gene meiosis regulator and mRNA stability factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables actin binding IEA
Inferred from Electronic Annotation
more info
  
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
  
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
myosin-11
Names
myosin, heavy chain 11, smooth muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    33952969..34004861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031892986.1 → XP_031748846.1  myosin-11 isoform X3

    UniProtKB/TrEMBL
    A0A6I8QTD8, A0A6I8SVG4
    Related
    ENSXETP00000072464.2, ENSXETT00000074797.2
    Conserved Domains (3) summary
    pfam01576
    Location:854 → 1934
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:32 → 71
    Myosin_N; Myosin N-terminal SH3-like domain
    cl22853
    Location:98 → 777
    Motor_domain; Myosin and Kinesin motor domain

  2. XM_031892985.1 → XP_031748845.1  myosin-11 isoform X1

    UniProtKB/TrEMBL
    A0A6I8SCY5, A0A6I8SVG4
    Related
    ENSXETP00000091134.2, ENSXETT00000067425.2
    Conserved Domains (3) summary
    pfam01576
    Location:854 → 1934
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:32 → 71
    Myosin_N; Myosin N-terminal SH3-like domain
    cl22853
    Location:98 → 777
    Motor_domain; Myosin and Kinesin motor domain

  3. XM_004917958.3 → XP_004918015.2  myosin-11 isoform X2

    UniProtKB/TrEMBL
    A0A6I8S4G1, A0A6I8SVG4
    Related
    ENSXETP00000092971.2, ENSXETT00000086634.2
    Conserved Domains (3) summary
    cd14921
    Location:98 → 770
    MYSc_Myh11; class II myosin heavy chain 11, motor domain
    pfam01576
    Location:847 → 1927
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:32 → 71
    Myosin_N; Myosin N-terminal SH3-like domain
Nucleotide Protein Strain
Heading Accession and Version

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