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exoc6 exocyst complex component 6 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100490668, updated on 8-Mar-2024

Summary

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Official Symbol
exoc6provided by Xenbase
Official Full Name
exocyst complex component 6provided by Xenbase
Primary source
Xenbase:XB-GENE-1013433
See related
Ensembl:ENSXETG00000018180
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
24
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (25343689..25509030, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (17048673..17203690, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 26 subfamily A member 1 Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene hematopoietically expressed homeobox Neighboring gene kinesin family member 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within exocytosis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within vesicle tethering involved in exocytosis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
exocyst complex component 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    25343689..25509030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031905941.1 → XP_031761801.1  exocyst complex component 6 isoform X3

    UniProtKB/TrEMBL
    F7AXL8
    Related
    ENSXETP00000039427.5, ENSXETT00000039427.5
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 769
    Sec15; Exocyst complex subunit Sec15-like

  2. XM_031905939.1 → XP_031761799.1  exocyst complex component 6 isoform X1

    UniProtKB/TrEMBL
    A0A8J1JV86
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 779
    Sec15; Exocyst complex subunit Sec15-like

  3. XM_031905940.1 → XP_031761800.1  exocyst complex component 6 isoform X2

    UniProtKB/TrEMBL
    A0A6I8QKS1
    Related
    ENSXETP00000073598.2, ENSXETT00000076864.2
    Conserved Domains (1) summary
    pfam04091
    Location:455 → 771
    Sec15; Exocyst complex subunit Sec15-like

  4. XM_018095925.2 → XP_017951414.2  exocyst complex component 6 isoform X4

    UniProtKB/TrEMBL
    A0A6I8RP48
    Related
    ENSXETP00000086598.2, ENSXETT00000099646.2
    Conserved Domains (1) summary
    pfam04091
    Location:455 → 761
    Sec15; Exocyst complex subunit Sec15-like
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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