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cul2 cullin 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100492608, updated on 8-Mar-2024

Summary

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Official Symbol
cul2provided by Xenbase
Official Full Name
cullin 2provided by Xenbase
Primary source
Xenbase:XB-GENE-960931
See related
Ensembl:ENSXETG00000008815
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See cul2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
23
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (21644661..21686003)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (13411799..13452701)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene cyclin Y Neighboring gene uncharacterized LOC105947699 Neighboring gene cAMP responsive element modulator Neighboring gene par-3 family cell polarity regulator Neighboring gene neuropilin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cullin-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cullin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    21644661..21686003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935163.5 → XP_002935209.2  cullin-2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8QNP0, A0A6I8QQW6, A0A6I8R137, A0A6I8R196, F6VLY7
    Related
    ENSXETP00000019375.5, ENSXETT00000019375.5
    Conserved Domains (2) summary
    pfam00888
    Location:14 → 644
    Cullin; Cullin family
    pfam10557
    Location:696 → 756
    Cullin_Nedd8; Cullin protein neddylation domain

  2. XM_002935164.5 → XP_002935210.2  cullin-2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8QNP0, A0A6I8SHI2
    Related
    ENSXETP00000092664.2, ENSXETT00000096113.2
    Conserved Domains (2) summary
    pfam00888
    Location:14 → 644
    Cullin; Cullin family
    pfam10557
    Location:677 → 735
    Cullin_Nedd8; Cullin protein neddylation domain

  3. XM_031904510.1 → XP_031760370.1  cullin-2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8QNP0, A0A6I8QQW6, A0A6I8R137, A0A6I8R196, F6VLY7
    Related
    ENSXETP00000074291.2, ENSXETT00000069527.2
    Conserved Domains (2) summary
    pfam00888
    Location:14 → 644
    Cullin; Cullin family
    pfam10557
    Location:696 → 756
    Cullin_Nedd8; Cullin protein neddylation domain
Nucleotide Protein Strain
Heading Accession and Version

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