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acvrl1 activin A receptor like type 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493282, updated on 8-Mar-2024

Summary

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Official Symbol
acvrl1provided by Xenbase
Official Full Name
activin A receptor like type 1provided by Xenbase
Primary source
Xenbase:XB-GENE-484224
See related
Ensembl:ENSXETG00000031897
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
alk1; hht2; orw2; skr3; alk-1; tsr-i; acvrlk1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (135062495..135106449)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (131757423..131810809)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene retinoblastoma 1 Neighboring gene lysophosphatidic acid receptor 6 Neighboring gene regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 Neighboring gene activin A receptor type 1B Neighboring gene trafficking regulator and scaffold protein tamalin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane receptor protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane receptor protein serine/threonine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine-protein kinase receptor R3
Names
activin A receptor type 1
activin A receptor type II-like 1
activin A receptor type IL

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    135062495..135106449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012957763.3 → XP_012813217.1  serine/threonine-protein kinase receptor R3 isoform X1

    See identical proteins and their annotated locations for XP_012813217.1

    UniProtKB/TrEMBL
    A0A6I8PLJ4
    Conserved Domains (2) summary
    cd14142
    Location:198 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:175 → 202
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  2. XM_031897141.1 → XP_031753001.1  serine/threonine-protein kinase receptor R3 isoform X2

    UniProtKB/TrEMBL
    A0A8J1J8K4
    Conserved Domains (2) summary
    cd14142
    Location:169 → 465
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:146 → 173
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  3. XM_002935116.5 → XP_002935162.2  serine/threonine-protein kinase receptor R3 isoform X1

    See identical proteins and their annotated locations for XP_002935162.2

    UniProtKB/TrEMBL
    A0A6I8PLJ4
    Related
    ENSXETP00000059199.3, ENSXETT00000065402.3
    Conserved Domains (2) summary
    cd14142
    Location:198 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:175 → 202
    TGF_beta_GS; Transforming growth factor beta type I GS-motif
Nucleotide Protein Strain
Heading Accession and Version

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