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LOC100493774 myosin-10 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493774, updated on 7-Sep-2023

Summary

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Official Symbol
LOC100493774provided by Xenbase
Official Full Name
myosin-10provided by Xenbase
Primary source
Xenbase:XB-GENE-29081879
See related
Ensembl:ENSXETG00000019058
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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Location:
chromosome: 7
Exon count:
46
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (104155655..104269880)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (96370124..96484627, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene scavenger receptor cysteine-rich type 1 protein M130-like Neighboring gene epsin 1 Neighboring gene MPV17 mitochondrial membrane protein-like Neighboring gene urotensin-2 receptor-like 3 Neighboring gene uncharacterized LOC105947900

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables actin binding IEA
Inferred from Electronic Annotation
more info
  
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
  
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
myosin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    104155655..104269880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012967418.2 → XP_012822872.2  myosin-10 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A6I8RVP5
    Conserved Domains (3) summary
    cd14920
    Location:99 → 778
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:855 → 1935
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain

  2. XM_004916218.4 → XP_004916275.2  myosin-10 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A6I8RVP5
    Related
    ENSXETP00000086795.2, ENSXETT00000100943.2
    Conserved Domains (3) summary
    cd14920
    Location:99 → 778
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:855 → 1935
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain

  3. XM_012967417.3 → XP_012822871.2  myosin-10 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A6I8RVP5
    Conserved Domains (3) summary
    cd14920
    Location:99 → 778
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:855 → 1935
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain

  4. XM_018095487.2 → XP_017950976.2  myosin-10 isoform X3

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A8J0T4E2
    Conserved Domains (3) summary
    cd14920
    Location:99 → 778
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:855 → 1935
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain

  5. XM_031905588.1 → XP_031761448.1  myosin-10 isoform X2

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A6I8SAY0
    Related
    ENSXETP00000094057.2, ENSXETT00000098101.2
    Conserved Domains (3) summary
    cd14920
    Location:99 → 771
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:848 → 1928
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain

  6. XM_031905589.1 → XP_031761449.1  myosin-10 isoform X4

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A8J1JU91
    Related
    ENSXETP00000084006.2, ENSXETT00000085525.2
    Conserved Domains (3) summary
    cd14920
    Location:99 → 771
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:848 → 1928
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain

  7. XM_031905587.1 → XP_031761447.1  myosin-10 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RER6, A0A6I8RVP5
    Conserved Domains (3) summary
    cd14920
    Location:99 → 778
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:855 → 1935
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 71
    Myosin_N; Myosin N-terminal SH3-like domain
Nucleotide Protein Strain
Heading Accession and Version

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