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rrn3 RRN3 homolog, RNA polymerase I transcription factor [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100497648, updated on 30-Sep-2021

Summary

Official Symbol
rrn3provided by Xenbase
Official Full Name
RRN3 homolog, RNA polymerase I transcription factorprovided by Xenbase
Primary source
Xenbase:XB-GENE-990491
See related
EnsemblRapid:ENSXETG00000005536
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See rrn3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (34332377..34350903, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (28426509..28446365, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene pyridoxal-dependent decarboxylase domain containing 1 Neighboring gene N-terminal asparagine amidase Neighboring gene uncharacterized LOC105948488 Neighboring gene ribosomal L1 domain containing 1

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
RNA polymerase I-specific transcription initiation factor RRN3
Names
RRN3 RNA polymerase I transcription factor homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    34332377..34350903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004917953.4XP_004918010.1  RNA polymerase I-specific transcription initiation factor RRN3

    See identical proteins and their annotated locations for XP_004918010.1

    Related
    ENSXETP00000097398.2, ENSXETT00000087538.2
    Conserved Domains (1) summary
    pfam05327
    Location:31550
    RRN3; RNA polymerase I specific transcription initiation factor RRN3
  2. XM_002937682.5XP_002937728.1  RNA polymerase I-specific transcription initiation factor RRN3

    See identical proteins and their annotated locations for XP_002937728.1

    Related
    ENSXETP00000071276.1, ENSXETT00000097291.2
    Conserved Domains (1) summary
    pfam05327
    Location:31550
    RRN3; RNA polymerase I specific transcription initiation factor RRN3
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