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slc1a1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100498100, updated on 8-Mar-2024

Summary

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Official Symbol
slc1a1provided by Xenbase
Official Full Name
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1provided by Xenbase
Primary source
Xenbase:XB-GENE-1011544
See related
Ensembl:ENSXETG00000011685
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
eaac1; eaat3
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (127369444..127401373, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (115131207..115163318, complement)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene cell division cycle 37-like 1 Neighboring gene spermatogenesis associated 6-like Neighboring gene adenylate kinase 3 Neighboring gene GLIS family zinc finger 3 Neighboring gene regulatory factor X3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Aminophylline and Ephedrine, but Not Flumazenil, Inhibit the Activity of the Excitatory Amino Acid Transporter 3 Expressed in Xenopus Oocytes and Reverse the Increased Activity by Propofol. Moon S, et al. Biomed Res Int, 2018. PMID 29888272, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables cysteine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glutamate:sodium symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables symporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
excitatory amino acid transporter 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    127369444..127401373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002934182.5 → XP_002934228.2  excitatory amino acid transporter 3

    UniProtKB/TrEMBL
    A0A6I8QJA5, A0A6I8QSR9
    Related
    ENSXETP00000076351.1, ENSXETT00000073188.2
    Conserved Domains (1) summary
    pfam00375
    Location:20 → 469
    SDF; Sodium:dicarboxylate symporter family

  2. XM_031890653.1 → XP_031746513.1  excitatory amino acid transporter 3

    UniProtKB/TrEMBL
    A0A6I8QJA5, A0A6I8QSR9
    Conserved Domains (1) summary
    pfam00375
    Location:20 → 469
    SDF; Sodium:dicarboxylate symporter family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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