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LOC100498620 probable RNA-binding protein 46 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100498620, updated on 15-Oct-2023

Summary

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Official Symbol
LOC100498620provided by Xenbase
Official Full Name
probable RNA-binding protein 46provided by Xenbase
Primary source
Xenbase:XB-GENE-29084359
See related
Ensembl:ENSXETG00000022412
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (138105261..138126345)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (127554489..127564380)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116410474 Neighboring gene proline rich transmembrane protein 3 Neighboring gene uncharacterized LOC100498463 Neighboring gene cysteine rich with EGF-like domains 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
probable RNA-binding protein 46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    138105261..138126345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018093696.2 → XP_017949185.2  probable RNA-binding protein 46

    UniProtKB/TrEMBL
    A0A803KAY4
    Related
    ENSXETP00000117541.1, ENSXETT00000109165.1
    Conserved Domains (1) summary
    TIGR01648
    Location:20 → 488
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases