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E230016K23Rik RIKEN cDNA E230016K23 gene [ Mus musculus (house mouse) ]

Gene ID: 100504464, updated on 23-Jun-2021

Summary

Official Symbol
E230016K23Rikprovided by MGI
Official Full Name
RIKEN cDNA E230016K23 geneprovided by MGI
Primary source
MGI:MGI:3041204
See related
Ensembl:ENSMUSG00000051832
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See E230016K23Rik in Genome Data Viewer
Location:
11; 11 C
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (83472887..83514519)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (83582061..83623693)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (83395558..83437197)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene chemokine (C-C motif) ligand 16, pseudogene Neighboring gene chemokine (C-C motif) ligand 9 Neighboring gene chemokine (C-C motif) ligand 6 Neighboring gene predicted gene, 38933 Neighboring gene uncharacterized LOC118567924 Neighboring gene ribosomal protein L9, pseudogene 1 Neighboring gene chemokine (C-C motif) ligand 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036452.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL596122
  2. NR_036453.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate 5' splice site, compared to variant 1.
    Source sequence(s)
    AK054074, AL596122
    Related
    ENSMUST00000125626.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    83472887..83514519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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