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9230112J17Rik RIKEN cDNA 9230112J17 gene [ Mus musculus (house mouse) ]

Gene ID: 100504561, updated on 23-Jun-2021

Summary

Official Symbol
9230112J17Rikprovided by MGI
Official Full Name
RIKEN cDNA 9230112J17 geneprovided by MGI
Primary source
MGI:MGI:1924999
See related
Ensembl:ENSMUSG00000111761
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in heart adult (RPKM 1.6), cerebellum adult (RPKM 0.7) and 15 other tissues See more
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Genomic context

See 9230112J17Rik in Genome Data Viewer
Location:
9; 9 B
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (60431250..60453165, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (60523967..60545882, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (60371464..60393689, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene thrombospondin, type I, domain containing 4 Neighboring gene RIKEN cDNA 2010001M07 gene Neighboring gene predicted gene, 22099 Neighboring gene predicted gene, 51679 Neighboring gene annexin A7 pseudogene Neighboring gene leucine rich repeat containing 49

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040463.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC112680, AK038653, CX239211
  2. NR_040464.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon compared to variant 1.
    Source sequence(s)
    AC112680, AK038653
    Related
    ENSMUST00000216749.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    60431250..60453165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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