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C/EBP CCAAT/enhancer binding protein [ Aplysia californica (California sea hare) ]

Gene ID: 100533490, updated on 14-Dec-2023

Summary

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Gene symbol
C/EBP
Gene description
CCAAT/enhancer binding protein
See related
EnsemblRapid:GeneID_100533490
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aplysia californica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Tectipleura; Aplysiida; Aplysioidea; Aplysiidae; Aplysia
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Genomic context

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See C/EBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current AplCal3.0 (GCF_000002075.1) Unplaced Scaffold NW_004797739.1 (422732..425735, complement)

NW_004797739.1Genomic Context describing neighboring genes Neighboring gene dynein heavy chain 3, axonemal Neighboring gene 39S ribosomal protein L38, mitochondrial Neighboring gene CCAAT/enhancer-binding protein gamma Neighboring gene uncharacterized LOC106012710

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004797739 Unplaced Scaffold Reference AplCal3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. C/EBP is an immediate-early gene required for the consolidation of long-term facilitation in Aplysia. Alberini CM, et al. Cell, 1994 Mar 25. PMID 8137425

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ApC/EBP; apC/EBP

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001204463.1 → NP_001191392.1  ApC/EBP

    See identical proteins and their annotated locations for NP_001191392.1

    Status: PROVISIONAL

    Source sequence(s)
    U00994
    UniProtKB/TrEMBL
    Q16949
    Related
    NP_001191392.1, NM_001204463.1
    Conserved Domains (1) summary
    cd14693
    Location:259 → 318
    bZIP_CEBP; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein (CEBP) and similar proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Aplysia californica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AplCal3.0 Primary Assembly

Genomic

  1. NW_004797739.1 Reference AplCal3.0 Primary Assembly

    Range
    422732..425735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013086449.2 → XP_012941903.1  apC/EBP isoform X1

    Related
    XP_012941903.1, XM_013086449.2
    Conserved Domains (1) summary
    cd14693
    Location:207 → 266
    bZIP_CEBP; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein (CEBP) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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