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STON1 stonin 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100534004, updated on 6-Jun-2024

Summary

Gene symbol
STON1
Gene description
stonin 1
See related
Ensembl:ENSCJAG00000010678
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
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Genomic context

See STON1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 14 NC_071455.1 (63981888..64045885, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 14 NC_048396.1 (62944093..63008063, complement)

Chromosome 14 - NC_071455.1Genomic Context describing neighboring genes Neighboring gene luteinizing hormone/choriogonadotropin receptor Neighboring gene general transcription factor IIA subunit 1 like Neighboring gene translationally-controlled tumor protein-like Neighboring gene uncharacterized LOC118147330 Neighboring gene U6 spliceosomal RNA Neighboring gene protein phosphatase 1 regulatory subunit 21 Neighboring gene protein SET-like

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of AP-2 adaptor complex IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001204840.2NP_001191769.2  stonin-1

    Status: PROVISIONAL

    Source sequence(s)
    JAALXP020000005
    UniProtKB/TrEMBL
    F6SFM4, U3BDS7, U3F4Y6
    Related
    ENSCJAP00000048192.1, ENSCJAT00000056816.1

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071455.1 Reference mCalJa1.2.pat.X

    Range
    63981888..64045885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035271473.2XP_035127364.2  stonin-1 isoform X1

    UniProtKB/TrEMBL
    F6SFM4, U3BDS7, U3F4Y6
  2. XM_035271472.2XP_035127363.2  stonin-1 isoform X1

    UniProtKB/TrEMBL
    F6SFM4, U3BDS7, U3F4Y6
  3. XM_008980718.4XP_008978966.3  stonin-1 isoform X1

    UniProtKB/TrEMBL
    F6SFM4, U3BDS7, U3F4Y6
  4. XM_035271475.2XP_035127366.2  stonin-1 isoform X1

    UniProtKB/TrEMBL
    F6SFM4, U3BDS7, U3F4Y6