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KRT4 keratin 4 [ Canis lupus familiaris (dog) ]

Gene ID: 100682832, updated on 24-Jul-2021

Summary

Gene symbol
KRT4
Gene description
keratin 4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See KRT4 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2291300..2298033)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (43955407..43962139, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (44354359..44361091, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2307781..2314517)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2293976..2300708)
105 previous assembly CanFam3.1 (GCF_000002285.3) 27 NC_006609.3 (2290152..2296884)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene keratin 78 Neighboring gene keratin 79 Neighboring gene keratin 3 Neighboring gene keratin 76

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
keratin, type II cytoskeletal 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001346015.1NP_001332944.1  keratin, type II cytoskeletal 4

    Status: VALIDATED

    Source sequence(s)
    JAAUVH010000362
    Conserved Domains (2) summary
    pfam00038
    Location:144457
    Filament; Intermediate filament protein
    pfam16208
    Location:14141
    Keratin_2_head; Keratin type II head

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    2291300..2298033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    2307781..2314517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    2293976..2300708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    44354359..44361091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43955407..43962139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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