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ESYT2 extended synaptotagmin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 100683048, updated on 8-Mar-2024

Summary

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Official Symbol
ESYT2provided by VGNC
Official Full Name
extended synaptotagmin 2provided by VGNC
Primary source
VGNC:VGNC:40484
See related
Ensembl:ENSCAFG00845014771
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
24
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (22450105..22533819, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (21223940..21305821, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (21456093..21538247, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (20817634..20899737, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (21401967..21484081, complement)

Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene uncharacterized LOC119869615 Neighboring gene non-SMC condensin II complex subunit G2 Neighboring gene dynein 2 intermediate chain 1 Neighboring gene vasoactive intestinal peptide receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum-plasma membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extended synaptotagmin-2
Names
extended synaptotagmin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051820.1 Reference ROS_Cfam_1.0

    Range
    22450105..22533819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690388.1 → XP_038546316.1  extended synaptotagmin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JVT3, A0A8I3NL46, A0A8P0N7X7
    Related
    ENSCAFP00845020892.1, ENSCAFT00845026505.1
    Conserved Domains (4) summary
    cd04030
    Location:847 → 972
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:609 → 699
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:421 → 541
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:227 → 406
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049276.1 Alternate UMICH_Zoey_3.1

    Range
    20817634..20899737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038496887.1 → XP_038352815.1  extended synaptotagmin-2 isoform X2

    Conserved Domains (4) summary
    cd04030
    Location:729 → 854
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:491 → 581
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:303 → 423
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:109 → 288
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

    Range
    21401967..21484081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038623151.1 → XP_038479079.1  extended synaptotagmin-2 isoform X3

    Conserved Domains (4) summary
    cd04030
    Location:729 → 854
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:491 → 581
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:303 → 423
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:109 → 288
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

    Range
    21456093..21538247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038559190.1 → XP_038415118.1  extended synaptotagmin-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0JVT3, A0A8I3NL46, A0A8P0N7X7
    Conserved Domains (4) summary
    cd04030
    Location:729 → 854
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:491 → 581
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:303 → 423
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:109 → 288
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21223940..21305821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038452202.1 → XP_038308130.1  extended synaptotagmin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C0JVT3, A0A8I3NL46, A0A8P0N7X7
    Conserved Domains (4) summary
    cd04030
    Location:729 → 854
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:491 → 581
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:303 → 423
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:109 → 288
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain
Nucleotide Protein
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