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LOC100683403 NKG2-A/NKG2-B type II integral membrane protein-like [ Canis lupus familiaris (dog) ]

Gene ID: 100683403, updated on 22-Jan-2024

Summary

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Gene symbol
LOC100683403
Gene description
NKG2-A/NKG2-B type II integral membrane protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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Location:
chromosome: 27
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (35654481..35726775)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (11194081..11220221, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (10772959..10835787, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (35538140..35606718)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (35484257..35530625) , (35578454..35636153)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene natural killer cells antigen CD94-like Neighboring gene GTPase HRas-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 6-like Neighboring gene NKG2-A/NKG2-B type II integral membrane protein-like Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of natural killer cell mediated cytotoxicity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stimulatory C-type lectin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NKG2-A/NKG2-B type II integral membrane protein-like; killer cell lectin-like receptor subfamily G member 2; uncharacterized protein LOC100683403

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    35654481..35726775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439005.1 → XP_038294933.1  uncharacterized protein LOC100683403 isoform X1

    Conserved Domains (3) summary
    cd03593
    Location:209 → 321
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    PHA02642
    Location:125 → 273
    PHA02642; C-type lectin-like protein; Provisional
    cl02432
    Location:376 → 432
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    35538140..35606718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513664.1 → XP_038369592.1  uncharacterized protein LOC100683403 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    35484257..35530625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

  2. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    35578454..35636153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641485.1 → XP_038497413.1  NKG2-A/NKG2-B type II integral membrane protein-like isoform X2

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    10772959..10835787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576784.1 → XP_038432712.1  uncharacterized protein LOC100683403 isoform X1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    11194081..11220221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038459813.1 → XP_038315741.1  killer cell lectin-like receptor subfamily G member 2 isoform X4

    Conserved Domains (2) summary
    cd03593
    Location:198 → 310
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    PHA02642
    Location:114 → 262
    PHA02642; C-type lectin-like protein; Provisional
Nucleotide Protein
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