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Erlin1 ER lipid raft associated 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100754719, updated on 8-Mar-2024

Summary

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Gene symbol
Erlin1
Gene description
ER lipid raft associated 1
See related
Ensembl:ENSCGRG00015023617
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614544.1 (479703..513793)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (17484529..17519025)

NW_003614544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118238524 Neighboring gene component of inhibitor of nuclear factor kappa B kinase complex Neighboring gene zinc finger matrin-type protein 2-like Neighboring gene cytochrome P450 2C23 Neighboring gene carboxypeptidase N subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SREBP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
erlin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614544.1 Reference CriGri_1.0 Primary Assembly

    Range
    479703..513793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003508456.4 → XP_003508504.4  erlin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MHP9
    Conserved Domains (1) summary
    cd03406
    Location:25 → 310
    SPFH_like_u3; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  2. XM_035459844.1 → XP_035315735.1  erlin-1 isoform X2

    UniProtKB/TrEMBL
    A0A9J7K6H7
    Conserved Domains (1) summary
    cd03406
    Location:25 → 275
    SPFH_like_u3; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    17484529..17519025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027407247.2 → XP_027263048.1  erlin-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MHP9
    Related
    ENSCGRP00015031323.1, ENSCGRT00015038266.2
    Conserved Domains (1) summary
    cd03406
    Location:25 → 310
    SPFH_like_u3; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  2. XM_035441818.1 → XP_035297709.1  erlin-1 isoform X5

    UniProtKB/TrEMBL
    A0A9J7K6H7
    Conserved Domains (1) summary
    cd03406
    Location:25 → 275
    SPFH_like_u3; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  3. XM_027407248.2 → XP_027263049.1  erlin-1 isoform X4

    UniProtKB/TrEMBL
    A0A9J7JKQ8
    Related
    ENSCGRP00015049110.1, ENSCGRT00015070501.1
Nucleotide Protein Strain
Heading Accession and Version

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