U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Tub TUB bipartite transcription factor [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768745, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Tub
Gene description
TUB bipartite transcription factor
Locus tag
I79_018949
See related
Ensembl:ENSCGRG00015003744
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Tub in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614918.1 (305699..367573, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (91734765..91753867, complement)

NW_003614918.1Genomic Context describing neighboring genes Neighboring gene LIM domain only 1 Neighboring gene RIC3 acetylcholine receptor chaperone Neighboring gene U6 spliceosomal RNA Neighboring gene eukaryotic translation initiation factor 3 subunit F Neighboring gene NLR family pyrin domain containing 10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tubby protein homolog
Names
Tubby protein-like
tubby bipartite transcription factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614918.1 Reference CriGri_1.0 Primary Assembly

    Range
    305699..367573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027442277.2 → XP_027298078.2  tubby protein homolog isoform X1

    UniProtKB/TrEMBL
    G3I637
    Conserved Domains (2) summary
    pfam01167
    Location:307 → 551
    Tub; Tub family
    pfam16322
    Location:71 → 279
    Tub_N; Tubby N-terminal

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    91734765..91753867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027410040.2 → XP_027265841.1  tubby protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C2M9D1, G3I637
    Related
    ENSCGRP00015050592.1, ENSCGRT00015053033.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.