U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Dcaf6 DDB1 and CUL4 associated factor 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770150, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Dcaf6
Gene description
DDB1 and CUL4 associated factor 6
Locus tag
I79_008835
See related
Ensembl:ENSCGRG00015008866
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Dcaf6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613889.1 (634929..721726, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (26988144..27095755)

NW_003613889.1Genomic Context describing neighboring genes Neighboring gene TOR signaling pathway regulator Neighboring gene G protein-coupled receptor 161 Neighboring gene mitochondrial pyruvate carrier 2 Neighboring gene adenylate cyclase 10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DDB1- and CUL4-associated factor 6
Names
Nuclear receptor interaction protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613889.1 Reference CriGri_1.0 Primary Assembly

    Range
    634929..721726 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027436485.1 → XP_027292286.1  DDB1- and CUL4-associated factor 6 isoform X3

  2. XM_027436484.1 → XP_027292285.1  DDB1- and CUL4-associated factor 6 isoform X2

  3. XM_035455752.1 → XP_035311643.1  DDB1- and CUL4-associated factor 6 isoform X1

    Conserved Domains (2) summary
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    26988144..27095755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445475.1 → XP_035301366.1  DDB1- and CUL4-associated factor 6 isoform X5

    UniProtKB/TrEMBL
    A0A9J7JYS6
    Related
    ENSCGRP00015011691.1, ENSCGRT00015014321.2
    Conserved Domains (2) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_027417136.2 → XP_027272937.1  DDB1- and CUL4-associated factor 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C2MHW4
    Related
    ENSCGRP00015011577.2, ENSCGRT00015014188.2

  3. XM_027417137.2 → XP_027272938.1  DDB1- and CUL4-associated factor 6 isoform X6

    UniProtKB/TrEMBL
    A0A8C2QKE8
    Related
    ENSCGRP00015011599.2, ENSCGRT00015014217.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.