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Pigv phosphatidylinositol glycan anchor biosynthesis class V [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770177, updated on 8-Mar-2024

Summary

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Gene symbol
Pigv
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Locus tag
I79_016194
See related
Ensembl:ENSCGRG00015016535
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Pigv in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614517.1 (398430..409696, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (19602418..19614278)

NW_003614517.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 18 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC103164187 Neighboring gene AT-rich interaction domain 1A Neighboring gene cytochrome c oxidase subunit 6A1, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614517.1 Reference CriGri_1.0 Primary Assembly

    Range
    398430..409696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459742.1 → XP_035315633.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M425, G3HYQ3
    Conserved Domains (1) summary
    pfam04188
    Location:9 → 494
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  2. XM_027440687.2 → XP_027296488.1  GPI mannosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A9J7FER8

  3. XM_027440688.2 → XP_027296489.1  GPI mannosyltransferase 2 isoform X7

    UniProtKB/TrEMBL
    A0A9J7FD01

  4. XM_007648929.4 → XP_007647119.2  GPI mannosyltransferase 2 isoform X5

    UniProtKB/TrEMBL
    A0A9J7FAN8

  5. XM_016978633.3 → XP_016834122.2  GPI mannosyltransferase 2 isoform X6

    UniProtKB/TrEMBL
    A0A9J7JC24

  6. XM_035459744.1 → XP_035315635.1  GPI mannosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQ09
    Conserved Domains (1) summary
    cl21590
    Location:4 → 398
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  7. XM_035459745.1 → XP_035315636.1  GPI mannosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQ09
    Conserved Domains (1) summary
    cl21590
    Location:4 → 398
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  8. XM_035459747.1 → XP_035315638.1  GPI mannosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQ09
    Conserved Domains (1) summary
    cl21590
    Location:4 → 398
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  9. XM_035459746.1 → XP_035315637.1  GPI mannosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQ09
    Conserved Domains (1) summary
    cl21590
    Location:4 → 398
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  10. XM_035459743.1 → XP_035315634.1  GPI mannosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    G3HYQ3
    Conserved Domains (1) summary
    cl21590
    Location:26 → 418
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RNA

  1. XR_483297.4 RNA Sequence

  2. XR_483298.4 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    19602418..19614278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399595.2 → XP_027255396.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M425, G3HYQ3
    Related
    ENSCGRP00015021707.2, ENSCGRT00015026644.2
    Conserved Domains (1) summary
    pfam04188
    Location:9 → 494
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  2. XM_035439539.1 → XP_035295430.1  GPI mannosyltransferase 2 isoform X8

    UniProtKB/TrEMBL
    A0A9J7K2X3
    Conserved Domains (1) summary
    cl21590
    Location:23 → 264
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_027399593.2 → XP_027255394.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M425, G3HYQ3
    Related
    ENSCGRP00015045391.1, ENSCGRT00015075699.1
    Conserved Domains (1) summary
    pfam04188
    Location:9 → 494
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  4. XM_035439540.1 → XP_035295431.1  GPI mannosyltransferase 2 isoform X8

    UniProtKB/TrEMBL
    A0A9J7K2X3
    Conserved Domains (1) summary
    cl21590
    Location:23 → 264
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_027399594.2 → XP_027255395.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M425, G3HYQ3
    Conserved Domains (1) summary
    pfam04188
    Location:9 → 494
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  6. XM_035439541.1 → XP_035295432.1  GPI mannosyltransferase 2 isoform X9

    UniProtKB/TrEMBL
    A0A9J7GPA3
    Related
    ENSCGRP00015021705.1, ENSCGRT00015026642.2
    Conserved Domains (1) summary
    cl21590
    Location:12 → 119
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  7. XM_027399592.2 → XP_027255393.1  GPI mannosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A9J7FER8

  8. XM_035439536.1 → XP_035295427.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M425, G3HYQ3
    Conserved Domains (1) summary
    pfam04188
    Location:9 → 494
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  9. XM_027399597.2 → XP_027255398.1  GPI mannosyltransferase 2 isoform X5

    UniProtKB/TrEMBL
    A0A9J7FAN8

  10. XM_027399599.2 → XP_027255400.1  GPI mannosyltransferase 2 isoform X7

    UniProtKB/TrEMBL
    A0A9J7FD01

  11. XM_027399598.2 → XP_027255399.1  GPI mannosyltransferase 2 isoform X6

    UniProtKB/TrEMBL
    A0A9J7JC24

  12. XM_035439537.1 → XP_035295428.1  GPI mannosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQ09
    Conserved Domains (1) summary
    cl21590
    Location:4 → 398
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  13. XM_035439538.1 → XP_035295429.1  GPI mannosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQ09
    Conserved Domains (1) summary
    cl21590
    Location:4 → 398
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RNA

  1. XR_003482054.2 RNA Sequence

  2. XR_003482055.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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