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LE1 lectin [ Glycine max (soybean) ]

Gene ID: 100818710, updated on 8-Jun-2019

Summary

Gene symbol
LE1
Gene description
lectin
Locus tag
GLYMA_02G012600
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Soja
Also known as
SBA; Agglutinin

Genomic context

See LE1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (1124450..1125467)
102 previous assembly Glycine_max_v2.0 (GCF_000004515.4) 2 NC_016089.2 (1124441..1125472)
101 previous assembly V1.1 (GCF_000004515.3) 2 NC_016089.1 (1124447..1125471)

Chromosome 2 - NC_016089.3Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 5C-2 Neighboring gene calvin cycle protein CP12-1, chloroplastic Neighboring gene bZIP transcription factor bZIP60 Neighboring gene vacuolar protein sorting-associated protein 51 homolog

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001354824.1NP_001341753.1  lectin precursor

    Status: VALIDATED

    Source sequence(s)
    ACUP03000691, AI941004, CA802137
    Conserved Domains (1) summary
    cd06899
    Location:36264
    lectin_legume_LecRK_Arcelin_ConA; legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

RefSeqs of Annotated Genomes: Glycine max Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v2.1 Primary Assembly

Genomic

  1. NC_016089.3 Reference Glycine_max_v2.1 Primary Assembly

    Range
    1124450..1125467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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