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EGFLAM-AS4 EGFLAM antisense RNA 4 [ Homo sapiens (human) ]

Gene ID: 100852408, updated on 10-Oct-2023

Summary

Official Symbol
EGFLAM-AS4provided by HGNC
Official Full Name
EGFLAM antisense RNA 4provided by HGNC
Primary source
HGNC:HGNC:41166
See related
Ensembl:ENSG00000248730 AllianceGenome:HGNC:41166
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
5p13.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (38282269..38290986, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (38531363..38540076, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (38282371..38291088, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene peroxiredoxin 4 pseudogene 2 Neighboring gene uncharacterized LOC124900966 Neighboring gene NANOG hESC enhancer GRCh37_chr5:38257291-38257792 Neighboring gene EGF like, fibronectin type III and laminin G domains Neighboring gene Sharpr-MPRA regulatory region 7458 Neighboring gene EGFLAM antisense RNA 2 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:38426700-38427899 Neighboring gene EGFLAM antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • CTD-2022B6.1
  • EGFLAM antisense RNA 4 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046219.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC014585
    Related
    ENST00000512496.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    38282269..38290986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    38531363..38540076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)