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LOC100909866 uncharacterized LOC100909866 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100909866, updated on 29-Feb-2024

Summary

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Symbol
LOC100909866provided by RGD
Full Name
uncharacterized LOC100909866provided by RGD
Primary source
RGD:6501250
See related
AllianceGenome:RGD:6501250
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 31.9) See more
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Genomic context

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See LOC100909866 in Genome Data Viewer
Location:
17p12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (35766054..35803304, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (35564871..35595211, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (37499966..37543970, complement)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102548193 Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene Neighboring gene SRY-box transcription factor 4 Neighboring gene ribosomal protein L29 like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    35766054..35803304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005495826.2 RNA Sequence

  2. XR_001841923.3 RNA Sequence

  3. XR_010059157.1 RNA Sequence

  4. XR_010059156.1 RNA Sequence

  5. XR_010059155.1 RNA Sequence

  6. XR_010059154.1 RNA Sequence

  7. XR_010059153.1 RNA Sequence

  8. XR_010059158.1 RNA Sequence

  9. XR_010059152.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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