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LOC100911508 uncharacterized LOC100911508 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911508, updated on 29-Feb-2024

Summary

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Symbol
LOC100911508provided by RGD
Full Name
uncharacterized LOC100911508provided by RGD
Primary source
RGD:6492288
See related
AllianceGenome:RGD:6492288
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Heart (RPKM 80.4) and Adrenal (RPKM 7.7) See more
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Genomic context

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Location:
3q21
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (70146004..70154135, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (49737890..49746043, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (51120625..51128868, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase class 1 domain containing 1, pseudogene 1 Neighboring gene growth factor receptor bound protein 14 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC120101557 Neighboring gene cordon-bleu WH2 repeat protein-like 1 Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    70146004..70154135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_145872.5 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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