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LOC100912202 uncharacterized LOC100912202 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100912202, updated on 29-Feb-2024

Summary

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Symbol
LOC100912202provided by RGD
Full Name
uncharacterized LOC100912202provided by RGD
Primary source
RGD:6488368
See related
AllianceGenome:RGD:6488368
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Heart (RPKM 11.4), Testes (RPKM 10.2) and 9 other tissues See more
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Genomic context

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See LOC100912202 in Genome Data Viewer
Location:
10q32.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (95116843..95120611, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (94617434..94621315, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (97937096..97940732, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene 5E5 antigen-like Neighboring gene solute carrier family 16, member 6 Neighboring gene arylsulfatase G Neighboring gene WD repeat domain, phosphoinositide interacting 1 Neighboring gene protein kinase cAMP-dependent type I regulatory subunit alpha Neighboring gene uncharacterized LOC134480894 Neighboring gene FAM20A, golgi associated secretory pathway pseudokinase Neighboring gene RIKEN cDNA 1700012B07 gene like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    95116843..95120611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010055860.1 RNA Sequence

  2. XR_010055859.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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