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NPIPA8 nuclear pore complex interacting protein family member A8 [ Homo sapiens (human) ]

Gene ID: 101059953, updated on 13-Aug-2021

Summary

Official Symbol
NPIPA8provided by HGNC
Official Full Name
nuclear pore complex interacting protein family member A8provided by HGNC
Primary source
HGNC:HGNC:41983
See related
Ensembl:ENSG00000214940
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NPIPA7; LCR16a9
Expression
Ubiquitous expression in skin (RPKM 33.2), ovary (RPKM 24.8) and 25 other tissues See more
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Genomic context

See NPIPA8 in Genome Data Viewer
Location:
16p12.3
Exon count:
9
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (18317919..18335860, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (18411776..18429717, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene geminin, DNA replication inhibitor pseudogene 2 Neighboring gene uncharacterized LOC105376751 Neighboring gene uncharacterized LOC105376753 Neighboring gene PKD1P4-NPIPA8 readthrough Neighboring gene PKD1P5-LOC105376752 readthrough Neighboring gene polycystin 1, transient receptor potential channel interacting pseudogene 4 Neighboring gene microRNA 6511a-4 Neighboring gene nuclear pore complex interacting protein family, member A9

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Readthrough PKD1P4-NPIPA8

Readthrough gene: PKD1P4-NPIPA8, Included gene: PKD1P4

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
nuclear pore complex-interacting protein family member A8
Names
Nuclear pore complex-interacting protein family member A7
morpheus gene family member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282511.3NP_001269440.1  nuclear pore complex-interacting protein family member A8

    See identical proteins and their annotated locations for NP_001269440.1

    Status: VALIDATED

    Source sequence(s)
    AC126755
    Consensus CDS
    CCDS61865.1
    UniProtKB/Swiss-Prot
    E9PJI5, P0DM63
    Related
    ENSP00000438887.2, ENST00000541810.5
    Conserved Domains (1) summary
    pfam06409
    Location:22221
    NPIP; Nuclear pore complex interacting protein (NPIP)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    18317919..18335860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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