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dmrt1 doublesex and mab-3 related transcription factor 1 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101161472, updated on 7-Jun-2022

Summary

Gene symbol
dmrt1
Gene description
doublesex and mab-3 related transcription factor 1
See related
EnsemblRapid:ENSORLG00000020817
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
dmy; DMRT1Y; dmrt1a; Dmrt1-A; Dmrt1-C
Orthologs
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Genomic context

See dmrt1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 9 NC_019867.2 (1177806..1215534, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) Unplaced Scaffold NW_004095176.1 (169639..204570)

Chromosome 9 - NC_019867.2Genomic Context describing neighboring genes Neighboring gene doublesex and mab-3 related transcription factor 2a Neighboring gene doublesex and mab-3 related transcription factor 3a Neighboring gene uncharacterized LOC110014729 Neighboring gene uncharacterized LOC111947863 Neighboring gene uncharacterized LOC110014618 Neighboring gene uncharacterized LOC110014730 Neighboring gene KN motif and ankyrin repeat domains 1a Neighboring gene fructose-1,6-bisphosphatase 1a

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
doublesex- and mab-3-related transcription factor 1
Names
Doublesex- and mab-3-related transcription factor 1Y
Y-linked doublesex- and mab-3-related transcription factor
Y-specific doublesex- and mab-3-related transcription factor
doublesex and mab-3 related transcription factor 1 c
male sex-determining protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001104680.2NP_001098150.2  doublesex- and mab-3-related transcription factor 1

    Status: VALIDATED

    Source sequence(s)
    CP020673
    Conserved Domains (2) summary
    pfam00751
    Location:2369
    DM; DM DNA binding domain
    pfam12374
    Location:81149
    Dmrt1; Double-sex mab3 related transcription factor 1

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019867.2 Reference ASM223467v1 Primary Assembly

    Range
    1177806..1215534 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023958133.1XP_023813901.1  doublesex- and mab-3-related transcription factor 1 isoform X1

    Related
    ENSORLP00000025780.2, ENSORLT00000025781.3
    Conserved Domains (2) summary
    pfam00751
    Location:2369
    DM; DM DNA binding domain
    pfam12374
    Location:81149
    Dmrt1; Double-sex mab3 related transcription factor 1
  2. XM_004086451.4XP_004086499.1  doublesex- and mab-3-related transcription factor 1 isoform X2

    Conserved Domains (2) summary
    pfam00751
    Location:2369
    DM; DM DNA binding domain
    pfam12374
    Location:81149
    Dmrt1; Double-sex mab3 related transcription factor 1
  3. XM_020701694.2XP_020557353.1  doublesex- and mab-3-related transcription factor 1 isoform X1

    Related
    ENSORLP00000038084.1, ENSORLT00000036289.1
    Conserved Domains (2) summary
    pfam00751
    Location:2369
    DM; DM DNA binding domain
    pfam12374
    Location:81149
    Dmrt1; Double-sex mab3 related transcription factor 1