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Spib Spi-B transcription factor [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699321, updated on 8-Mar-2024

Summary

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Gene symbol
Spib
Gene description
Spi-B transcription factor
Locus tag
GW7_15323
See related
Ensembl:ENSHGLG00000007080
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624832.1 (4110462..4116657, complement)

NW_004624832.1Genomic Context describing neighboring genes Neighboring gene golgi associated RAB2 interactor 5A Neighboring gene myosin binding protein C2 Neighboring gene DNA polymerase delta 1, catalytic subunit Neighboring gene nuclear receptor subfamily 1 group H member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624832 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Spi-B
Names
Transcription factor Spi-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624832.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    4110462..4116657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004866823.2 → XP_004866880.1  transcription factor Spi-B

    See identical proteins and their annotated locations for XP_004866880.1

    UniProtKB/TrEMBL
    G5B8S6
    Related
    ENSHGLP00000009866.1, ENSHGLT00000009975.1
    Conserved Domains (1) summary
    smart00413
    Location:169 → 257
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

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