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Tpcn1 two pore segment channel 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101723791, updated on 6-Jul-2020

Summary

Gene symbol
Tpcn1
Gene description
two pore segment channel 1
Locus tag
GW7_10156
See related
Ensembl:ENSHGLG00000012159
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
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Genomic context

See Tpcn1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
37
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624747.1 (19179378..19237799, complement)

NW_004624747.1Genomic Context describing neighboring genes Neighboring gene phospholipase B domain containing 2 Neighboring gene uncharacterized LOC110348904 Neighboring gene solute carrier family 8 member B1 Neighboring gene IQ motif containing D Neighboring gene RBPJ interacting and tubulin associated 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624747 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General protein information

Preferred Names
two pore calcium channel protein 1
Names
Two pore calcium channel protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624747.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    19179378..19237799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021257421.1XP_021113080.1  two pore calcium channel protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00520
    Location:476735
    Ion_trans; Ion transport protein
  2. XM_021257420.1XP_021113079.1  two pore calcium channel protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00520
    Location:476735
    Ion_trans; Ion transport protein
  3. XM_021257425.1XP_021113084.1  two pore calcium channel protein 1 isoform X3

    Conserved Domains (1) summary
    pfam00520
    Location:441700
    Ion_trans; Ion transport protein
  4. XM_021257424.1XP_021113083.1  two pore calcium channel protein 1 isoform X2

    Conserved Domains (1) summary
    pfam00520
    Location:476727
    Ion_trans; Ion transport protein
  5. XM_004843737.3XP_004843794.1  two pore calcium channel protein 1 isoform X4

    See identical proteins and their annotated locations for XP_004843794.1

    UniProtKB/TrEMBL
    G5AKW7
    Related
    ENSHGLP00000016997.1, ENSHGLT00000017168.1
    Conserved Domains (2) summary
    pfam00520
    Location:143331
    Ion_trans; Ion transport protein
    pfam12325
    Location:710780
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
  6. XM_021257423.1XP_021113082.1  two pore calcium channel protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00520
    Location:476735
    Ion_trans; Ion transport protein
  7. XM_021257422.1XP_021113081.1  two pore calcium channel protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00520
    Location:476735
    Ion_trans; Ion transport protein
  8. XM_021257428.1XP_021113087.1  two pore calcium channel protein 1 isoform X6

    Conserved Domains (1) summary
    pfam00520
    Location:372631
    Ion_trans; Ion transport protein
  9. XM_021257430.1XP_021113089.1  two pore calcium channel protein 1 isoform X6

    Conserved Domains (1) summary
    pfam00520
    Location:372631
    Ion_trans; Ion transport protein
  10. XM_021257429.1XP_021113088.1  two pore calcium channel protein 1 isoform X6

    Conserved Domains (1) summary
    pfam00520
    Location:372631
    Ion_trans; Ion transport protein
  11. XM_021257427.1XP_021113086.1  two pore calcium channel protein 1 isoform X6

    Conserved Domains (1) summary
    pfam00520
    Location:372631
    Ion_trans; Ion transport protein
  12. XM_021257426.1XP_021113085.1  two pore calcium channel protein 1 isoform X5

    Conserved Domains (1) summary
    pfam00520
    Location:407666
    Ion_trans; Ion transport protein
  13. XM_021257431.1XP_021113090.1  two pore calcium channel protein 1 isoform X7

    Conserved Domains (1) summary
    pfam00520
    Location:476692
    Ion_trans; Ion transport protein

RNA

  1. XR_002394520.1 RNA Sequence

  2. XR_002394522.1 RNA Sequence

  3. XR_002394521.1 RNA Sequence

  4. XR_002394523.1 RNA Sequence

  5. XR_002394524.1 RNA Sequence

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