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Csta cystatin A [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101725559, updated on 8-Mar-2024

Summary

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Gene symbol
Csta
Gene description
cystatin A
Locus tag
GW7_19711
See related
Ensembl:ENSHGLG00000001592
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Cystatin-A
Orthologs
human all
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Genomic context

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See Csta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624912.1 (657771..671304)

NW_004624912.1Genomic Context describing neighboring genes Neighboring gene CD86 molecule Neighboring gene calcium sensing receptor Neighboring gene S-formylglutathione hydrolase pseudogene Neighboring gene mitochondrial matrix import factor 23 Neighboring gene family with sequence similarity 162 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624912 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystatin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624912.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    657771..671304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004873596.2 → XP_004873653.1  cystatin-A

    See identical proteins and their annotated locations for XP_004873653.1

    UniProtKB/TrEMBL
    G5AV85
    Related
    ENSHGLP00000002099.1, ENSHGLT00000002147.1
    Conserved Domains (1) summary
    pfam00031
    Location:4 → 90
    Cystatin; Cystatin domain
Nucleotide Protein
Heading Accession and Version

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