U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101753185 chlorophyll a-b binding protein of LHCII type III, chloroplastic [ Setaria italica (foxtail millet) ]

Gene ID: 101753185, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101753185
Gene description
chlorophyll a-b binding protein of LHCII type III, chloroplastic
Locus tag
SETIT_030808mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101753185 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) II NC_028451.1 (43274428..43275677)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675962.1 (43275207..43276454)

Chromosome II - NC_028451.1Genomic Context describing neighboring genes Neighboring gene F-box protein At1g61340-like Neighboring gene organic cation/carnitine transporter 2 Neighboring gene myosin-3 Neighboring gene uncharacterized LOC101754015

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in photosynthesis, light harvesting in photosystem I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to light stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in chloroplast thylakoid membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plastoglobule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chlorophyll a-b binding protein of LHCII type III, chloroplastic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028451.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    43274428..43275677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004957966.2 → XP_004958023.1  chlorophyll a-b binding protein of LHCII type III, chloroplastic

    UniProtKB/TrEMBL
    K3ZW27
    Conserved Domains (1) summary
    PLN00025
    Location:5 → 268
    PLN00025; photosystem II light harvesting chlorophyll a/b binding protein; Provisional
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases