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GLDC glycine decarboxylase [ Anas platyrhynchos (mallard) ]

Gene ID: 101791583, updated on 8-Mar-2024

Summary

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Gene symbol
GLDC
Gene description
glycine decarboxylase
See related
EnsemblRapid:ENSAPLG00030008842
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See GLDC in Genome Data Viewer
Location:
chromosome: Z
Exon count:
25
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) Z NC_051804.1 (30329499..30370668, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 3 NC_040048.1 (23327376..23327740)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) Z NC_040075.1 (28144489..28181616, complement)

Chromosome Z - NC_051804.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101797220 Neighboring gene ubiquitin like with PHD and ring finger domains 2 Neighboring gene lysine demethylase 4C Neighboring gene uncharacterized LOC106015675

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and expression of glycine decarboxylase (p120) as a duck hepatitis B virus pre-S envelope-binding protein. Li J, et al. J Biol Chem, 1999 Sep 24. PMID 10488106
  2. Characterization of a 120-Kilodalton pre-S-binding protein as a candidate duck hepatitis B virus receptor. Li JS, et al. J Virol, 1996 Sep. PMID 8709225, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine dehydrogenase (decarboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine decarboxylation via glycine cleavage system IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycine cleavage complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine dehydrogenase (decarboxylating), mitochondrial
Names
glycine decarboxylase p protein
NP_001297296.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310367.1 → NP_001297296.1  glycine dehydrogenase (decarboxylating), mitochondrial

    See identical proteins and their annotated locations for NP_001297296.1

    Status: PROVISIONAL

    Source sequence(s)
    AF137264
    UniProtKB/TrEMBL
    A0A8B9SZ16, Q9PUU9
    Related
    ENSAPLP00030016900.1, ENSAPLT00030023204.1
    Conserved Domains (3) summary
    COG1003
    Location:495 → 981
    GcvP2; Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
    PRK05367
    Location:61 → 1013
    PRK05367; glycine dehydrogenase; Provisional
    pfam02347
    Location:69 → 492
    GDC-P; Glycine cleavage system P-protein

RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051804.1 Reference ZJU1.0 Primary Assembly

    Range
    30329499..30370668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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