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Csta cystatin A [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101826258, updated on 8-Mar-2024

Summary

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Gene symbol
Csta
Gene description
cystatin A
See related
EnsemblRapid:ENSMAUG00000011953
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429192.1 (54980047..54990261)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801632.1 (4256310..4266549)

NW_024429192.1Genomic Context describing neighboring genes Neighboring gene CD86 molecule Neighboring gene uncharacterized LOC121141950 Neighboring gene uncharacterized LOC121141951 Neighboring gene calcium sensing receptor Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial matrix import factor 23 Neighboring gene family with sequence similarity 162 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystatin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429192.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    54980047..54990261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005071522.4 → XP_005071579.1  cystatin-A

    UniProtKB/TrEMBL
    A0A1U7QRM4
    Related
    ENSMAUP00000011325.1, ENSMAUT00000015208.2
    Conserved Domains (1) summary
    pfam00031
    Location:4 → 92
    Cystatin; Cystatin domain
Nucleotide Protein
Heading Accession and Version

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