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Smad4 SMAD family member 4 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101843946, updated on 8-Mar-2024

Summary

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Gene symbol
Smad4
Gene description
SMAD family member 4
See related
EnsemblRapid:ENSMAUG00000036788
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429184.1 (81816831..81880128)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801652.1 (235012..301194)

NW_024429184.1Genomic Context describing neighboring genes Neighboring gene elaC ribonuclease Z 1 Neighboring gene malic enzyme 2 Neighboring gene mex-3 RNA binding family member C Neighboring gene DCC netrin 1 receptor Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heteromeric SMAD protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mothers against decapentaplegic homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281698.1 → NP_001268627.1  mothers against decapentaplegic homolog 4

    See identical proteins and their annotated locations for NP_001268627.1

    Status: PROVISIONAL

    Source sequence(s)
    AB209970
    UniProtKB/TrEMBL
    Q3LGB1
    Related
    ENSMAUP00000059707.1, ENSMAUT00000059220.1
    Conserved Domains (2) summary
    cd10492
    Location:14 → 138
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:320 → 541
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4

RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429184.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    81816831..81880128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040737637.1 → XP_040593571.1  mothers against decapentaplegic homolog 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CXY2
    Related
    ENSMAUP00000044436.1, ENSMAUT00000046289.1
    Conserved Domains (2) summary
    cd10492
    Location:14 → 138
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:320 → 541
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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