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ZEB1 zinc finger E-box binding homeobox 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101867139, updated on 3-Apr-2024

Summary

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Gene symbol
ZEB1
Gene description
zinc finger E-box binding homeobox 1
See related
Ensembl:ENSMFAG00000042570
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 9 NC_052263.1 (31035253..31219525)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 9 NC_022280.1 (31939279..32125303)

Chromosome 9 - NC_052263.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123575540 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC123566924 Neighboring gene Rho GTPase activating protein 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger E-box-binding homeobox 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052263.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    31035253..31219525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045361880.1 → XP_045217815.1  zinc finger E-box-binding homeobox 1 isoform X3

  2. XM_045361881.1 → XP_045217816.1  zinc finger E-box-binding homeobox 1 isoform X4

  3. XM_005564912.3 → XP_005564969.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A2K5W193, G8F295
    Related
    ENSMFAP00000030827.1
    Conserved Domains (5) summary
    smart00389
    Location:577 → 613
    HOX; Homeodomain
    COG5048
    Location:913 → 966
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:890 → 910
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:224 → 246
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:930 → 955
    zf-H2C2_2; Zinc-finger double domain

  4. XM_005564913.3 → XP_005564970.1  zinc finger E-box-binding homeobox 1 isoform X6

    UniProtKB/TrEMBL
    G8F295
    Conserved Domains (5) summary
    smart00389
    Location:576 → 612
    HOX; Homeodomain
    COG5048
    Location:912 → 965
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:889 → 909
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:223 → 245
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:929 → 954
    zf-H2C2_2; Zinc-finger double domain

  5. XM_045361883.1 → XP_045217818.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  6. XM_045361887.1 → XP_045217822.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  7. XM_045361889.1 → XP_045217824.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  8. XM_045361882.1 → XP_045217817.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  9. XM_045361886.1 → XP_045217821.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  10. XM_045361888.1 → XP_045217823.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  11. XM_045361884.1 → XP_045217819.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  12. XM_045361885.1 → XP_045217820.1  zinc finger E-box-binding homeobox 1 isoform X7

    Conserved Domains (4) summary
    sd00017
    Location:688 → 708
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:22 → 44
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:728 → 753
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:363 → 411
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  13. XM_005564909.3 → XP_005564966.1  zinc finger E-box-binding homeobox 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5W1B1, A0A2K5W1E0
    Related
    ENSMFAP00000030776.1
    Conserved Domains (5) summary
    smart00389
    Location:594 → 630
    HOX; Homeodomain
    COG5048
    Location:930 → 983
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:907 → 927
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:241 → 263
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:947 → 972
    zf-H2C2_2; Zinc-finger double domain

  14. XM_005564910.3 → XP_005564967.1  zinc finger E-box-binding homeobox 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5W1E0
    Related
    ENSMFAP00000030806.1
    Conserved Domains (5) summary
    smart00389
    Location:593 → 629
    HOX; Homeodomain
    COG5048
    Location:929 → 982
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:906 → 926
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:240 → 262
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:946 → 971
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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