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CANX calnexin [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925077, updated on 3-Apr-2024

Summary

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Gene symbol
CANX
Gene description
calnexin
See related
Ensembl:ENSMFAG00000031934
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 6 NC_052260.1 (174758229..174791686)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 6 NC_022277.1 (179656825..179705755)

Chromosome 6 - NC_052260.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S18-like Neighboring gene high mobility group protein B3-like Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene leukotriene C4 synthase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calnexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052260.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    174758229..174791686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015452368.2 → XP_015307854.1  calnexin isoform X1

    UniProtKB/TrEMBL
    A0A2K5UYZ9, A0A7N9DBR5
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  2. XM_005558771.3 → XP_005558828.1  calnexin isoform X1

    See identical proteins and their annotated locations for XP_005558828.1

    UniProtKB/TrEMBL
    A0A2K5UYZ9, A0A7N9DBR5
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  3. XM_045395062.1 → XP_045250997.1  calnexin isoform X2

  4. XM_045395061.1 → XP_045250996.1  calnexin isoform X1

    UniProtKB/TrEMBL
    A0A2K5UYZ9
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  5. XM_005558773.3 → XP_005558830.1  calnexin isoform X1

    See identical proteins and their annotated locations for XP_005558830.1

    UniProtKB/TrEMBL
    A0A2K5UYZ9, A0A7N9DBR5
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family
Nucleotide Protein
Heading Accession and Version

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