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LOC101929998 uncharacterized LOC101929998 [ Homo sapiens (human) ]

Gene ID: 101929998, updated on 10-Oct-2023

Summary

Gene symbol
LOC101929998
Gene description
uncharacterized LOC101929998
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 29.7) See more
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Genomic context

Location:
7q36.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (154055585..154060570, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (155230067..155235052, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (153752670..153757655, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986750 Neighboring gene NANOG hESC enhancer GRCh37_chr7:153367335-153367836 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:153501631-153501821 Neighboring gene uncharacterized LOC107986722 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:153555187-153556386 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:153583199-153583700 Neighboring gene dipeptidyl peptidase like 6 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:153632460-153632651 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:153640855-153641356 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:153641357-153641856 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:153686082-153686582 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:153748374-153748976 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:153797461-153797962 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:153880891-153881704 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:153881705-153882518 Neighboring gene NANOG hESC enhancer GRCh37_chr7:153895575-153896144 Neighboring gene uncharacterized LOC105375582 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:153991562-153992062 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:154376061-154376644 Neighboring gene uncharacterized LOC105375581

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136254.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006019

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    154055585..154060570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    155230067..155235052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)