U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01030 long intergenic non-protein coding RNA 1030 [ Homo sapiens (human) ]

Gene ID: 101937451, updated on 10-Oct-2023

Summary

Official Symbol
LINC01030provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1030provided by HGNC
Primary source
HGNC:HGNC:49016
See related
Ensembl:ENSG00000253799 AllianceGenome:HGNC:49016
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.1) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
8q21.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (90592775..90606063, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (91716352..91730078, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (91605003..91618291, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901975 Neighboring gene uncharacterized LOC107986955 Neighboring gene RNA, 5S ribosomal pseudogene 273 Neighboring gene Sharpr-MPRA regulatory region 14354 Neighboring gene NANOG hESC enhancer GRCh37_chr8:91581326-91581827 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:91591610-91592572 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27613 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19351 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19352 Neighboring gene translation initiation factor IF-2 Neighboring gene transmembrane protein 64

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104062.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AB015752, BU568440
    Related
    ENST00000517505.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    90592775..90606063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    91716352..91730078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)